CDS

Accession Number TCMCG006C96317
gbkey CDS
Protein Id XP_013672921.1
Location complement(join(23218188..23218215,23218312..23218412,23218502..23218588,23218857..23218949,23219035..23219115,23219212..23219425,23222449..23222708,23222883..23223302))
Gene LOC106377269
GeneID 106377269
Organism Brassica napus

Protein

Length 427aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA293435
db_source XM_013817467.2
Definition methylthioalkylmalate synthase 1, chloroplastic-like isoform X1 [Brassica napus]

EGGNOG-MAPPER Annotation

COG_category E
Description Belongs to the alpha-IPM synthase homocitrate synthase family
KEGG_TC -
KEGG_Module -
KEGG_Reaction R08619        [VIEW IN KEGG]
R08623        [VIEW IN KEGG]
KEGG_rclass RC00004        [VIEW IN KEGG]
RC00067        [VIEW IN KEGG]
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
KEGG_ko ko:K15741        [VIEW IN KEGG]
EC 2.3.3.17        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko00966        [VIEW IN KEGG]
ko01110        [VIEW IN KEGG]
ko01210        [VIEW IN KEGG]
map00966        [VIEW IN KEGG]
map01110        [VIEW IN KEGG]
map01210        [VIEW IN KEGG]
GOs -

Sequence

CDS:  
ATGATCTCCATCTCCCCCACTGCTTCCACCATGGTCGTCCAGTCAGTTCTACACTTTGCATCTTCCTTCCCTTCTCTCGGTCTAAACCGTCCATACAAAAGGCCGTCCTTGTCCACCTCGTGTTGCTCCTCTTTGTCCAATAAGGCTGGGACTGGTGCTACTGATTTCAAACCCATCGTGGAAAGGTGGCCGGAGTATATACCGAACAAGCTCCCCGACAAGAACTATGTGCGTGTATTGGATACGACGCTCCGTGACGGGGAACAATCCCCTGGTGCAGCACTTACTCCACCGCAGAAGCTAGAGATTGCCCGGCAGCTTGCCAAACTCCGAGTAGACATCATGGAAGTTGGTTTCCCTGCGTCATCAGAGGAAGAGTTCGAAACCATCAAGACCATTGCCAAGACTGTAGGGAATGAGGTGGATGAAGAAACAGGTTATGTTCCAGTTATATGCGGCCTCGCACGATGCAACCATAGAGACATCGAGGCGGTTTGGGAAGCAGTGAAGTACGCCAAGAGGCAGACAATAATCATATTCATATCTACTAGTGACATTCACATGAAATTTAAGTTGAAAAAGACTAAAGAAGAAGTCATTCAGATGGCAGTGAGTAGTGTTAGCTATGCGAAGAGCTTAGGCTTCAACGACATCATATTTGGTTGCGAAGATGCCTGCAGGTCGGAGAAAGAGTTTCTGTGCAAGATTTTAGGAGAAGCGATTAAAGTGGGTGCAACCACTGTCAACATCGGGGACACGGTAGGGATCAACATGCCGCAAGAAACTTGGGAACTTGTGAGCTACCTCAAAGCCAACACTCCAGGAATCGATGATGTTGTCTTAAGCGTTCATTGTCACAACGACCTTGGTGTTGCTACCGCTAATGCAATCGCCGGTATATGTGCGGGAGCAAGACAAGTTGACGTAACGGTCAACGGAATAGGTGAGAGAAGTGGGAATGCAGCACTAGAAGAGGTCGTAATGGCTTTGAAATGTCGAGGGTCATACGTGATGGATGGTGTTTACACAAGAATAGACACACGCCAAATTATGGCTACTAGCAACATGGTTCAAGAATATACTGGGCTGCGTGTTCAAGCGCATAAGCCTATAGTTGGAGCGAACTGTTTTGTTCACGAGAGCGACCTTCATCAGGATGTAATCTTGAAAAGTCGGAGAACATATGAGATCTTATCTCCAGAAGATGTTGGGGTTGTAAAAACTGAAAATTCTGGCATTGCTCGTGGCAAGCTTAGTGGACGTCATGCTGTGAAAGATGTCTGA
Protein:  
MISISPTASTMVVQSVLHFASSFPSLGLNRPYKRPSLSTSCCSSLSNKAGTGATDFKPIVERWPEYIPNKLPDKNYVRVLDTTLRDGEQSPGAALTPPQKLEIARQLAKLRVDIMEVGFPASSEEEFETIKTIAKTVGNEVDEETGYVPVICGLARCNHRDIEAVWEAVKYAKRQTIIIFISTSDIHMKFKLKKTKEEVIQMAVSSVSYAKSLGFNDIIFGCEDACRSEKEFLCKILGEAIKVGATTVNIGDTVGINMPQETWELVSYLKANTPGIDDVVLSVHCHNDLGVATANAIAGICAGARQVDVTVNGIGERSGNAALEEVVMALKCRGSYVMDGVYTRIDTRQIMATSNMVQEYTGLRVQAHKPIVGANCFVHESDLHQDVILKSRRTYEILSPEDVGVVKTENSGIARGKLSGRHAVKDV